Welcome to the CESM Workflow for CMIP6 documentationΒΆ
Contents:
- Instructions on how to setup a CMIP6 experiment
- Instructions on how to run an experiment with Cylc
- How to modify a CESM Cylc workflow if you need to make changes
- How to create a Cylc CESM workflow from scratch
- Common questions and answers
- How do you stop a simulation once it has started?
- How do you pause a run in order to evaluate it and start it back up?
- How do you restart a Cylc suite if it has stopped?
- Where are my diagnostics copied to?
- Where do I look to find out why something failed?
- What do I do if my timeseries or xconform task fails?
- Where are all of my files?
- What are the user_nl_<comp>.fincls files in case directory?
- How do you continue a run after hitting the BGC error?
- How do you continue a run after hitting the CLM/PIO error?
- How do you rerun the postprocessing of the timeseries and the standardized CMIP6 files?
- If I want to recreate a case from scratch, what do I have to remove to get rid of the existing case?
- Extra Instructions for CMIP6 Experiments
- Instructions on how to setup and run PyConform independent of the workflow
What the workflow script will setup for you:
- Creates the CESM case
- Sets up the full post processing suite
- Retrieves the CMIP6 experiment information from the experiment database
- Determines which variables need to be outputted by CESM
- Sets your CESM and post processing XML variables
- Creates the input specifications needed to generate the published version of the data
- Sends the case information to the database for an initial check-in
- Sets up the Cylc environment for you based on your CESM environment.
What can the Cylc interface run automatically for you:
- All CESM jobs
- The short term archiver between each CESM job
- The four main component diagnostic packages
- The time series generator
- Create the publishable files
- Command line scripts
Indices and tables